Package: mrfDepth 1.0.10

Jakob Raymaekers

mrfDepth: Depth Measures in Multivariate, Regression and Functional Settings

Tools to compute depth measures and implementations of related tasks such as outlier detection, data exploration and classification of multivariate, regression and functional data.

Authors:Pieter Segaert [aut], Mia Hubert [aut], Peter Rousseeuw [aut], Jakob Raymaekers [aut, cre], Kaveh Vakili [ctb]

mrfDepth_1.0.10.tar.gz
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mrfDepth.pdf |mrfDepth.html✨
mrfDepth/json (API)
NEWS

# Install 'mrfDepth' in R:
install.packages('mrfDepth', repos = c('https://psegaert.r-universe.dev', 'https://cloud.r-project.org'))

Peer review:

Bug tracker:https://github.com/psegaert/mrfdepth/issues

Uses libs:
  • openblas– Optimized BLAS
  • c++– GNU Standard C++ Library v3
Datasets:
  • bloodfat - Blood data for patients with narrowing arteries
  • cardata90 - Car data from Consumer Reports in 1990
  • characterA - Writing trajectories of the letter 'a'.
  • characterI - Writing trajectories of the letter i.
  • geological - Composition of elements in soil samples around the Baltic Sea
  • glass - EXPMA spectra of glass samples
  • mri - Intensities of MRI images
  • octane - Near infrared spectra of gasoline samples.
  • plane - Fighter plane dataset
  • stars - Stars data
  • tablets - Near Infrared Spectroscopy responses for a batch of pills
  • wine - Proton Nuclear Magnetic Resonance spectra of 40 different wine samples

On CRAN:

4.95 score 3 stars 3 packages 66 scripts 587 downloads 1 mentions 29 exports 42 dependencies

Last updated 6 years agofrom:a1118ddeef. Checks:OK: 1 WARNING: 5 NOTE: 3. Indexed: yes.

TargetResultDate
Doc / VignettesOKOct 25 2024
R-4.5-win-x86_64WARNINGOct 25 2024
R-4.5-linux-x86_64WARNINGOct 25 2024
R-4.4-win-x86_64WARNINGOct 25 2024
R-4.4-mac-x86_64WARNINGOct 25 2024
R-4.4-mac-aarch64WARNINGOct 25 2024
R-4.3-win-x86_64NOTEOct 25 2024
R-4.3-mac-x86_64NOTEOct 25 2024
R-4.3-mac-aarch64NOTEOct 25 2024

Exports:adjOutlbagdistancebagplotcmltestcompBagplotdepthContourdirOutldistSpacedprojdepthdprojmedianfheatmapfomfOutlhdepthhdepthmedianmedcouplemfdmfdmedianmrainbowplotoutlyingnessplotContoursprojdepthprojmedianrdepthrdepthmediansdepthsprojdepthsprojmediansymtest

Dependencies:abindclicolorspacefansifarvergeometryggplot2gluegtableisobandlabelinglatticelifecyclelinproglpSolvemagicmagrittrMASSMatrixmatrixStatsmgcvmunsellnlmepillarpkgconfigplyrR6RColorBrewerRcppRcppArmadilloRcppEigenRcppProgressreshape2rlangscalesstringistringrtibbleutf8vctrsviridisLitewithr

Readme and manuals

Help Manual

Help pageTopics
Adjusted outlyingness of points relative to a datasetadjOutl
Bagdistance of points relative to a datasetbagdistance
Draws a bagplot, a bivariate boxplotbagplot
Blood data for patients with narrowing arteriesbloodfat
Car data from Consumer Reports in 1990cardata90
Writing trajectories of the letter 'a'.characterA
Writing trajectories of the letter i.characterI
Test for linearity of the conditional median in simple regressioncmltest
Location estimate based on the halfspace depthcompBagplot
Depth contours of multivariate datadepthContour
Directional outlyingness of points relative to a datasetdirOutl
distSpacedistSpace
Directional projection depth of points relative to a datasetdprojdepth
Location estimates based on directional projection depth.dprojmedian
Creates MFOD heatmapfheatmap
Draws the Functional Outlier Map (FOM)fom
Functional outlyingness measures for functional datafOutl
Composition of elements in soil samples around the Baltic Seageological
EXPMA spectra of glass samplesglass
Halfspace depth of points relative to a datasethdepth
Location estimates based on halfspace depth.hdepthmedian
A robust measure of skewness for univariate datamedcouple
Multivariate functional depth for functional datamfd
Multivariate functional median for functional data.mfdmedian
Rainbow plot for bivariate datamrainbowplot
Intensities of MRI imagesmri
Near infrared spectra of gasoline samples.octane
Stahel-Donoho outlyingness of points relative to a datasetoutlyingness
Fighter plane datasetplane
Draws depth contours of bivariate dataplotContours
Projection depth of points relative to a datasetprojdepth
Location estimates based on projection depth.projmedian
Regression depth of hyperplanesrdepth
Hyperplane of maximal regression depthrdepthmedian
Simplicial depth of points relative to a datasetsdepth
Skewness-adjusted projection depth of points relative to a datasetsprojdepth
Location estimates based on skewness-adjusted projection depth.sprojmedian
stars datastars
Test for angular symmetry around a specified center for bivariate datasymtest
Near Infrared Spectroscopy responses for a batch of pillstablets
Proton Nuclear Magnetic Resonance spectra of 40 different wine sampleswine